| Oberliga | GS. | W | G. | V. | Dp. | |||
| thuis | 29 | 19 | 8 | 2 | 58 | : | 18 | |
| uit | 29 | 8 | 10 | 11 | 39 | : | 41 | |
| Neutrale plaats | 1 | 0 | 1 | 0 | 1 | : | 1 | |
| ∑ | 59 | 27 | 19 | 13 | 98 | : | 60 | |
| FDGB-Pokal | GS. | W | G. | V. | Dp. | |||
| uit | 2 | 1 | 0 | 1 | 2 | : | 2 | |
| ∑ | 2 | 1 | 0 | 1 | 2 | : | 2 | |
| 2. Bundesliga | GS. | W | G. | V. | Dp. | |||
| thuis | 1 | 1 | 0 | 0 | 2 | : | 0 | |
| uit | 1 | 0 | 1 | 0 | 0 | : | 0 | |
| ∑ | 2 | 1 | 1 | 0 | 2 | : | 0 | |
| 3. Liga | GS. | W | G. | V. | Dp. | |||
| thuis | 3 | 1 | 0 | 2 | 2 | : | 7 | |
| uit | 3 | 1 | 1 | 1 | 5 | : | 5 | |
| ∑ | 6 | 2 | 1 | 3 | 7 | : | 12 | |
| Regionalliga Nordost | GS. | W | G. | V. | Dp. | |||
| thuis | 1 | 1 | 0 | 0 | 2 | : | 0 | |
| uit | 1 | 0 | 0 | 1 | 1 | : | 2 | |
| ∑ | 2 | 1 | 0 | 1 | 3 | : | 2 | |
| Oberliga NOFV-Süd | GS. | W | G. | V. | Dp. | |||
| thuis | 4 | 3 | 1 | 0 | 8 | : | 4 | |
| uit | 4 | 3 | 1 | 0 | 4 | : | 1 | |
| ∑ | 8 | 6 | 2 | 0 | 12 | : | 5 | |
| TOTAAL | GS. | W | G. | V. | Dp. | |||
| thuis | 38 | 25 | 9 | 4 | 72 | : | 29 | |
| uit | 40 | 13 | 13 | 14 | 51 | : | 51 | |
| Neutrale plaats | 1 | 0 | 1 | 0 | 1 | : | 1 | |
| ∑ | 79 | 38 | 23 | 18 | 124 | : | 81 | |
| FDGB-Pokal | |||||
| 1964/1965 | Halve Finale | SC Chemie Halle | - | SC Motor Jena | 0:1 (0:1) |
| 1961/1962 | Halve Finale | SC Chemie Halle | - | SC Motor Jena | 2:1 (0:0, 1:1) n.v. |
| 2. Bundesliga | |||||
| 1991/1992 Zuid | 18. Ronde | Hallescher FC | - | FC Carl Zeiss Jena | 0:0 (0:0) |
| 1991/1992 Zuid | 7. Ronde | FC Carl Zeiss Jena | - | Hallescher FC | 2:0 (1:0) |
| Regionalliga Nordost | |||||
| 2024/2025 | 28. Ronde | FC Carl Zeiss Jena | - | Hallescher FC | 2:0 (2:0) |
| 2024/2025 | 11. Ronde | Hallescher FC | - | FC Carl Zeiss Jena | 2:1 (1:0) |
|
Bij wedstrijden met een strafschoppenserie wordt de eindstand van de reguliere speeltijd als resultaat meegeteld. |
Duitsland 
![FC Carl Zeiss Jena [Vrouwen]](https://s.hs-data.com/bilder/wappen/mini/2382.gif?fallback=png "FC Carl Zeiss Jena [Vrouwen]"){kind=small}
![FC Carl Zeiss Jena II [Vrouwen]](https://s.hs-data.com/bilder/wappen/mini/12519.gif?fallback=png "FC Carl Zeiss Jena II [Vrouwen]"){kind=small}
![FC Carl Zeiss Jena [A-jun]](https://s.hs-data.com/bilder/wappen/mini/10850.gif?fallback=png "FC Carl Zeiss Jena [A-jun]"){kind=small}
![FC Carl Zeiss Jena [B-jun]](https://s.hs-data.com/bilder/wappen/mini/14892.gif?fallback=png "FC Carl Zeiss Jena [B-jun]"){kind=small}
![FC Carl Zeiss Jena II [B-jun]](https://s.hs-data.com/bilder/wappen/mini/37759.gif?fallback=png "FC Carl Zeiss Jena II [B-jun]"){kind=small}
![FC Carl Zeiss Jena [B-mei]](https://s.hs-data.com/bilder/wappen/mini/13944.gif?fallback=png "FC Carl Zeiss Jena [B-mei]"){kind=small}
![FC Carl Zeiss Jena [C-jun]](https://s.hs-data.com/bilder/wappen/mini/20651.gif?fallback=png "FC Carl Zeiss Jena [C-jun]"){kind=small}